[root]/src/dr/evolution
alignment
(15 files, 3765 lines)
coalescent
(27 files, 4279 lines)
structure
(5 files, 770 lines)
colouring
(11 files, 3239 lines)
continuous
(1 files, 359 lines)
datatype
(19 files, 2368 lines)
distance
(4 files, 523 lines)
geo
(0 files, 0 lines)
io
(9 files, 2582 lines)
parsimony
(1 files, 317 lines)
sequence
(2 files, 503 lines)
tree
(30 files, 4689 lines)
util
(7 files, 1084 lines)
wrightfisher
(5 files, 1010 lines)
| Author | Changes | Lines of Code | Lines per Change |
|---|---|---|---|
| Totals | 7 (100.0%) | 208 (100.0%) | 29.7 |
| aaron.darling | 3 (42.9%) | 202 (97.1%) | 67.3 |
| dong.w.xie | 4 (57.1%) | 6 (2.9%) | 1.5 |
Trunk: @Override is JDK1.6 code.
6 lines of code changed in 4 files:
Adding some additional stray files that are part of the metagenome linkage model.
Adding a new model of hidden linkage among reads in a metagenomic dataset. The model and its application to metagenomic datasets is described in a manuscript in preparation by Aaron Darling and Jonathan Eisen. This is commit phase 1: adding new files. Phase 2 comes next, committing related changes to existing files.
202 lines of code changed in 3 files: