StatSVN - Directory src/dr/evolution/colouring/

Lines of Code

src/dr/evolution/colouring/ Lines of Code

Developers

Author	Changes	Lines of Code	Lines per Change
Totals	26 (100.0%)	1455 (100.0%)	55.9
alexei.drummond	7 (26.9%)	830 (57.0%)	118.5
rambaut	8 (30.8%)	560 (38.5%)	70.0
jheled	6 (23.1%)	41 (2.8%)	6.8
msuchard	5 (19.2%)	24 (1.6%)	4.8

Most Recent Commits

msuchard 2010-05-28 03:24 Rev.: 3192

Maintaining functional compatibility between ASTL and ASBTL. Need to figure out how to ditch one.

24 lines of code changed in 5 files:

src/dr/evolution/colouring: ColourChangeMatrix.java (new), SubstitutionModelToColourChangeMatrix.java (new 16), TreeColouring.java (+4)

jheled 2009-11-01 14:20 Rev.: 2486

generify

13 lines of code changed in 2 files:

src/dr/evolution/colouring: StructuredColourSampler.java (new)

jheled 2009-09-09 08:26 Rev.: 2227

generify and auto intelliJ

11 lines of code changed in 2 files:

src/dr/evolution/colouring: TwoColourSampler.java (+11 -11)

jheled 2009-09-07 14:23 Rev.: 2218

automatic idea changes and generify

17 lines of code changed in 2 files:

src/dr/evolution/colouring: DefaultBranchColouring.java (+17 -17)

alexei.drummond 2009-07-13 22:26 Rev.: 1844

Refactoring to remove illegal dependencies. No classes in dr.evolution.* packages should depend on classes in dr.evomodel.* or dr.inference.* or dr.evomodelxml. Also converted dr.evolution.coalescent.IntervalType to enum and minor other tidy ups.

830 lines of code changed in 7 files:

src/dr/evolution/colouring: BasicColourSampler.java (+61 -63), BranchColouring.java (+33 -6), ColourSampler.java (+8 -9), StructuredColourSampler.java (+728 -736)

rambaut 2006-12-04 09:38 Rev.: 83

Merged some fixes and improvements I made in the 1.4 branch in to the trunk. This includes the fix for Issue 8 in LogCombiner. Also, I have made some interfaces in the TreeColouring stuff so that other sources of TreeColouring (such as the Transmission history stuff) can provide coloured trees for logging.

560 lines of code changed in 8 files:

src/dr/evolution/colouring: BasicColourSampler.java (+6 -6), BranchColouring.java (+14 -281), ColourSampler.java (+1 -1), DefaultBranchColouring.java (+298), DefaultTreeColouring.java (new 211), StructuredColourSampler.java (+10 -11), TreeColouring.java (+8 -198), TreeColouringProvider.java (new 12)