StatSVN - Directory src/dr/evolution/coalescent/structure/

Lines of Code

src/dr/evolution/coalescent/structure/ Lines of Code

Developers

Author	Changes	Lines of Code	Lines per Change
Totals	11 (100.0%)	413 (100.0%)	37.5
alexei.drummond	8 (72.7%)	404 (97.8%)	50.5
jheled	2 (18.2%)	7 (1.7%)	3.5
rambaut	1 (9.1%)	2 (0.5%)	2.0

Most Recent Commits

alexei.drummond 2009-07-13 22:26 Rev.: 1844

Refactoring to remove illegal dependencies. No classes in dr.evolution.* packages should depend on classes in dr.evomodel.* or dr.inference.* or dr.evomodelxml. Also converted dr.evolution.coalescent.IntervalType to enum and minor other tidy ups.

404 lines of code changed in 8 files:

src/dr/evolution/coalescent/structure: ColouredTreeIntervals.java (+24 -25), Event.java (new), MetaPopulation.java (new 47), StructuredCoalescent.java (new 256), StructuredCoalescentSimulator.java (new)

jheled 2008-11-01 06:13 Rev.: 1267

Remove depracated use of constant demographic in Wilson Balding operator
Merge some uses of the "rootHeight" constant string

4 lines of code changed in 1 file:

src/dr/evolution/coalescent/structure: StructuredCoalescentSimulator.java (+4 -2)

jheled 2007-01-19 07:48 Rev.: 150

change units type to an enum
Allow a log file name to be relative to main beast xml file when prefixed with a ./
minor jdoc and 1.5 cleanup

3 lines of code changed in 1 file:

src/dr/evolution/coalescent/structure: ColouredTreeIntervals.java (+3 -3)

rambaut 2006-12-04 09:38 Rev.: 83

Merged some fixes and improvements I made in the 1.4 branch in to the trunk. This includes the fix for Issue 8 in LogCombiner. Also, I have made some interfaces in the TreeColouring stuff so that other sources of TreeColouring (such as the Transmission history stuff) can provide coloured trees for logging.

2 lines of code changed in 1 file:

src/dr/evolution/coalescent/structure: ColouredTreeIntervals.java (+2 -4)