[root]/src/dr/app/gui/components
Author | Changes | Lines of Code | Lines per Change |
---|---|---|---|
Totals | 27 (100.0%) | 809 (100.0%) | 29.9 |
rambaut | 21 (77.8%) | 736 (91.0%) | 35.0 |
dong.w.xie@gmail.com | 5 (18.5%) | 72 (8.9%) | 14.4 |
dong.w.xie | 1 (3.7%) | 1 (0.1%) | 1.0 |
BEAUti now generates a hierarchical coalescent simulator that generates monophyletic groups and required clade heights. Clade heights can be given in the Taxon Sets table in the column called 'age'. These should lie inside any hard prior bounds (this is not done automatically).
14 lines of code changed in 2 files:
trunk: merge prior dialog and distribution changes to trunk
9 lines of code changed in 1 file:
trunk: add a new constructor to exclude the lower bound or upper bound during validation, but this is not available in branch 1.7 at moment
27 lines of code changed in 1 file:
I think PriorDialog validation is now working as one might expect.
14 lines of code changed in 1 file:
trunk: merge Issue 587: BEAUti prior dialog ignores validation in the text field if pressing Enter key
13 lines of code changed in 1 file:
trunk: merge Issue 584:BEAUti prior dialog validation bugs, and Issue 586: BEAUti prior dialog Cancel not working
3 lines of code changed in 1 file:
trunk: merge Issue 583: BEAUti prior dialog text field validation should give sensible error message
20 lines of code changed in 1 file:
Cleaning up bugs in XML generation...
2 lines of code changed in 1 file:
Some serious cleaning up of how priors are specified. This allows appropriate prior choices for different 'flavours' of parameters (non-negative, zero-one interval, discrete, HPM, CMTC rates). Truncation of the the prior is now a switch and bounds so can be applied to any prior (although the UI is not in place for this yet).
11 lines of code changed in 1 file:
Made validation of RealNumberFields a bit prettier - doesn't report MIN_DOUBLE/MAX_DOUBLE as bounds.
16 lines of code changed in 1 file:
Trunk: merge change.
1 lines of code changed in 1 file:
I forgot to change the package locations of some files copied in from elsewhere
4 lines of code changed in 7 files:
4 lines of code changed in 4 files:
Switched all uses of org.virion.jam.* to jam.* (org.virion.jam.* is not being updated or fixed). This has touched alot of files but mainly just in the import statements.
671 lines of code changed in 4 files: