Bayesian phylogenetic analysis. Beast 2 provides a library for
MCMC and evolutionary computing.
DensiTree
DensiTree
is a program for qualitative analysis of sets of trees that make it
possible to visually inspect the posterior distribution of an MCMC run over a
tree. Many features of the posterior distribution are easily visible, such as
agreement/disagreement of tree topologies, uncertainty in node heights and
relative dominance of particular topologies.
Computational geographic phylogenetics,
applied for example to language data, as demonstrated here
and here.
My math genealogy in pdf and in svg with links to wikipedia.
You might need a bit of zooming in or scrolling to see something interesting.
This was generated with a perl script.
DensiTree